BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A11LP1|AL426458
(509 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1638 815 0.0
>3x_Contig1638
Length = 14042
Score = 815 bits (401), Expect = 0.0
Identities = 446/471 (94%), Gaps = 3/471 (0%)
Strand = Plus / Plus
Query: 1 ttcatcgtcctktccacacctcgttaccgttttcatcgacatatctgtcctttcttgaca 60
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939 ttcatcgtcctg-ccacacctcgttaccgttttcatcgacatatctgtcctttcttgaca 997
Query: 61 catacgatgcaacacgtgacaaaactgaaccaggatgggaaatggctctagcaatctcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 catacgatgcaacacgtgacaaaactgaaccaggatgggaaatggctctagcaatctcat 1057
Query: 121 tggtattggtttgcgtatggtcgaaatccgctacatccggcatataakcgtttgtttgat 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1058 tggtattggtttgcgtatggtcgaaatccgctacatccggcatataatcgtttgtttgat 1117
Query: 181 cattatcattagatttcatagagtcagactctggtgtaatattgttgttattcatggttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 cattatcattagatttcatagagtcagactctggtgtaatattgttgttattcatggttg 1177
Query: 241 aratctgttttggttttggttactccagakcatgcragasatacattacaatrrtarkar 300
| ||||||||||||||||||||||||||| ||| | ||| |||||||||||| || |
Sbjct: 1178 aaatctgttttggttttggttactccagatcatacaagacatacattacaataataataa 1237
Query: 301 gacacaaccacaacaagattggttatgaacgttgattgtcgaaaaaragacgccaaacca 360
|||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||
Sbjct: 1238 gacacaaccacaacaagattgg--aagaacgttgattgtcgaaaaaaagacgccaaacca 1295
Query: 361 gttacttttatatatcargavacgcaggtgtggtacatccagcgggctcatactgnatta 420
||||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||
Sbjct: 1296 gttacttttatatatcaagaaacgcaggtgtggtacatccagcgggctcatactgaatta 1355
Query: 421 gagttatttgrgtgagagakagtraaavggtaccggagatgaggttagtga 471
||||||||| |||||||| ||| ||| |||||||||||||||||||||||
Sbjct: 1356 gagttattttagtgagagatagtaaaaaggtaccggagatgaggttagtga 1406
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3593
Number of Sequences: 1807
Number of extensions: 3593
Number of successful extensions: 153
Number of sequences better than 1.0e-20: 1
length of query: 509
length of database: 10,358,551
effective HSP length: 16
effective length of query: 493
effective length of database: 10,329,639
effective search space: 5092512027
effective search space used: 5092512027
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.9 bits)
S2: 49 (100.1 bits)